PLINK v1.90b3z 64-bit (22 Nov 2015)
Options in effect:
  --bfile sNL4
  --freq
  --out sNL4f

Hostname: n0034.compute.hpc
Working directory: /hpc/hers_en/keijk/course
Start time: Wed Mar  2 15:19:48 2022

Random number seed: 1646230788
128722 MB RAM detected; reserving 64361 MB for main workspace.
711202 variants loaded from .bim file.
3488 people (1998 males, 1490 females) loaded from .fam.
3488 phenotype values loaded from .fam.
Using 1 thread (no multithreaded calculations invoked.
Before main variant filters, 3488 founders and 0 nonfounders present.
Calculating allele frequencies... done.
Warning: 663139 het. haploid genotypes present (see sNL4f.hh ); many commands
treat these as missing.
Warning: Nonmissing nonmale Y chromosome genotype(s) present; many commands
treat these as missing.
Total genotyping rate is 0.994361.
--freq: Allele frequencies (founders only) written to sNL4f.frq .

End time: Wed Mar  2 15:19:49 2022